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Testing amino acid polymorphisms associated with regions in antigenic space

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mapdeduce

A python library for:

  • Handling antigenic maps and sequence data.
  • Testing associations between amino acid polymorphisms and antigenic diversity.
  • Plotting antigenic maps.

Example

Installation

pip install git+https://github.com/acorg/mapdeduce.git

R is also required, with the "statmod" library.

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Testing amino acid polymorphisms associated with regions in antigenic space

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