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the GMOD database schema
PLpgSQL 45 23
Source code for JBrowse 2, a modern React-based genome browser
TypeScript 271 74
JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.
JavaScript 473 199
Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.
Groovy 138 87
Read CRAM v3 and v2 in node or in the browser
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Parse BAM and BAM index files in javascript for node and the browser
Read UCSC Trix indexes in pure JavaScript
JBrowse 2 genome hubs... for all the things!
A parser for the BED format including autoSql support
A multiple sequence alignment viewer
multiple sequence alignment browser plugin for JBrowse 2
3D protein structure visualizer in jbrowse 2 - WIP
Variant Call Format (VCF) parser